Synthetic Escherichia coli mixture samples with variable coverage

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dc.contributor.affiliationHelsinki Institute for Information Technology, Department of Computer Science, University of Helsinki-Mäklin, Tommi
dc.contributor.authorMäklin, Tommi
dc.date.accessioned2025-04-29T14:03:05Z
dc.date.issued2021-09-29
dc.date.issued2021-09-29
dc.descriptionThis dataset contains the synthetic mixture samples and reference sequences - as well as the appropriate metadata - that were originally used in the 2021 revision of the mSWEEP manuscript. There are 87 samples in total, each containing 100bp paired-end Illumina sequencing reads from 10 different Escherichia coli strains from 10 different lineages. The number of reads is set so that the sequencing coverage of the individual strains varies between 50x and 0.10x and sums up to 100x.
dc.identifierhttps://doi.org/10.5281/zenodo.5535713
dc.identifier.urihttps://datakatalogi.helsinki.fi/handle/123456789/5533
dc.rights.licensecc-by-4.0
dc.subjectmSWEEP
dc.subjectsynthetic mixture
dc.subjectescherichia coli
dc.subjectvariable coverage
dc.titleSynthetic Escherichia coli mixture samples with variable coverage
dc.typedataset

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